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Nutrition, disease, biodiversity: do we need a new relationship with animals?

Zoonoses, diseases passing from animals to humans, have tripled in the last century

with James Bowers, Chief editor at Polytechnique Insights
On December 15th, 2021 |
5min reading time
Thierry LeFrancois
Thierry Lefrançois
Director of Biological Systems Department at CIRAD
Key takeaways
  • The health crisis has sped up the “One Health” movement whose objective is to combine the study of human health, animal health and ecosystem health.
  • Today, 75% of infectious diseases affecting humans are of animal origin. These are called “zoonoses” and are due to microorganisms (viruses, bacteria, or parasites) capable of infecting both humans and animals.
  • Human activities such as deforestation, intensive farming and urbanisation bring domestic animals and wild animals closer to each other, which favours the emergence of zoonotic diseases.
  • New technologies capable of detecting the places and times where new epidemics are likely to appear are under development. These can help to identify circulating pathogens that could represent a pandemic threat.

With the effect of Covid-19 being felt around the globe, it would seem now is as good a time as any to focus on pre­ven­tion of future pan­de­mics. A vast num­ber of emer­ging infec­tious diseases in humans are of ani­mal ori­gin and, as such, the One Health approach has been thrust into the spotlight. 

In Novem­ber 2020, the One Health High-Level Expert Panel Fra­me­work was announ­ced at the Paris Peace Forum with the goal of inte­gra­ting human, ani­mal, and envi­ron­men­tal health sys­tems into one. Sym­bo­lic of this shift in thin­king from a human-cen­tred to all-encom­pas­sing approach, Thier­ry Lefran­çois (Cirad) is the first vete­ri­na­rian to join the French Covid-19 scien­ti­fic advi­so­ry board. 

With the concept of One Health, it is hoped that resear­chers can iden­ti­fy emer­ging diseases that could trans­fer from ani­mals to humans as ear­ly as pos­sible. Why is the focus on envi­ron­men­tal issues so important ? 

Three-quar­ters of infec­tious diseases in humans are of an ani­mal ori­gin because some micro-orga­nisms (viruses, bac­te­ria, or para­sites) or para­sites, that can infect cer­tain ani­mals and also humans. The asso­cia­ted diseases, cal­led zoo­noses, include Ebo­la of which bats are sus­pec­ted hosts, avian influen­za in domes­tic and wild birds, Rabies in dogs or, of course, SARS-CoV‑2 (Covid-19); even though we expect it to have ori­gi­na­ted in bats, we do not know which spe­cies allo­wed the trans­fer to humans (pan­glion, mink etc.). Zoo­noses occur via a range of pro­cesses that are lar­ge­ly affec­ted by the proxi­mi­ty bet­ween dif­ferent spe­cies and the­re­fore by the environment

It should be said that this infor­ma­tion is not new : the scien­ti­fic com­mu­ni­ty has war­ned of the dan­ger of zoo­noses for years. Bet­ween 1940 and 2000, trans­mis­sion of disease from ani­mals to humans has more than tri­pled. The rea­sons for such are quite simple : viruses spread much more easi­ly bet­ween ani­mals that are rai­sed in dense, some­time unsa­ni­ta­ry, condi­tions such as those in inten­sive far­ming prac­tises – as the spread of the Covid-19 pan­de­mic to Mink farms attests ! On top of that, des­truc­tion of habi­tats via defo­res­ta­tion or repla­cing natu­ral zones with agri­cul­tu­ral or urban ins­tal­la­tions pushes live­stock, domes­tic ani­mals, and humans clo­ser to wild ani­mals, favou­ring the spread of disease bet­ween spe­cies. Hence, the risk of infec­tious diseases is lar­ge­ly affec­ted by eco­sys­tems, cli­mate fac­tors, agri­cul­tu­ral prac­tices, and a range of other socio-eco­no­mic factors. 

We are seeing deve­lop­ment of new tech­no­lo­gies that can help us detect where and when new epi­de­mics may be happening.

How close are we to being able to pre­dict future pandemics ? 

It is extre­me­ly dif­fi­cult to pre­dict which zoo­noses [ani­mal-human diseases] will trans­fer from one spe­cies to ano­ther and, in the past, there has been lit­tle suc­cess in doing so. Rather, we are seeing deve­lop­ment of new tech­no­lo­gies that can help us detect where and when new epi­de­mics may be hap­pe­ning by pin­poin­ting where the spread of disease is beco­ming pro­ble­ma­tic. As such, we can anti­ci­pate which patho­gens alrea­dy in cir­cu­la­tion are like­ly to become pandemic. 

In the Euro­pean pro­ject, MOOD1, which CIRAD is coor­di­na­ting, we are stu­dying how we can use arti­fi­cial intel­li­gence to detect epi­de­mics as ear­ly as pos­sible. The AI ana­lyses tex­tual data avai­lable on the Inter­net – from social media posts, for example – as oppo­sed to loo­king at tra­di­tio­nal epi­de­mio­lo­gi­cal data, which require bio­lo­gi­cal samples and tes­ting. Ana­ly­sis of infor­ma­tion in this way can offer insights very ear­ly on in an epi­de­mic. We can seek out rela­ti­ve­ly infor­mal terms like “swine flu” or “fever”, for ins­tance, and com­pare their occur­rences to iden­ti­fy where there may be clus­ters appearing.

Moreo­ver, we can car­ry out “syn­dro­mic sur­veillance” by using Google searches for key­words or trends in phar­ma­ceu­ti­cal sales. ­Hence, the goal here is not com­ple­te­ly around pre­ven­tion, ins­tead it is more about detec­ting emer­ging pan­de­mics as ear­ly as pos­sible by tap­ping into the huge amount of infor­ma­tion alrea­dy avai­lable online. Expe­ri­ments were done using this tech­no­lo­gy to stu­dy the arri­val of bird flu, with posi­tive results sho­wing that – had this type of approach been avai­lable – it could have hel­ped us act quicker.

Even though anti­ci­pa­tion is key, are there still things that we can do in terms of prevention ? 

Yes. And, actual­ly, pre­ven­tion is high­ly impor­tant because it involves loo­king into socio-cultu­ral sys­tems in a way that will allow us to avoid emer­gences and prevent cir­cu­la­tion of patho­gens in ani­mals before they can be trans­mit­ted to humans. We are kee­ping close tabs on a num­ber of diseases around the world inclu­ding the Afri­can Swine Flu, rabies or Nipah (an infec­tion found in bats in South-East Asia). Stu­dies show that efforts are like­ly to payoff : invest­ment in pre­ven­tion costs 100 times less than a future pan­de­mic2

To do this, there isn’t much point in tar­ge­ting spe­ci­fic ani­mals because trans­mis­sion varies depen­ding on the spe­cies. Rather, we need to find a way of pre­ven­ting fac­tors that favour trans­mis­sion, which tend to be loca­tion dependent. As such we have iden­ti­fied high-risk zones where we are focu­sing much atten­tion from Mexi­co to Zim­babwe to Viet­nam. In an ideal world, we would be able to take bio­di­ver­si­ty into account in human urban and agri­cul­tu­ral deve­lop­ment. If we are expan­ding a town or city, then could we create path­ways for nature to move through ? Will there be domes­tic ani­mals or live­stock ? Will it be zone of inten­sive far­ming ? Ans­we­ring these ques­tions can help ana­lyse the risks and consi­der envi­ron­men­tal health with that of ani­mals and humans. 

The concept of One Health has become an inter­na­tio­nal col­la­bo­ra­tion. What kind of the coope­ra­tion are we seeing happen ?

Gene­ral­ly, States have been reliant on sepa­rate ins­ti­tu­tions to deal with health, envi­ron­ment and agri­cul­ture. But with One Health, we pro­pose an inte­gra­ted approach on the very highest level. In mid-April 2021, the call for experts clo­sed and the selec­ted inter­na­tio­nal coun­cil will bring ~20 inter­na­tio­nal experts toge­ther in May this year to work toge­ther and pro­vide mul­ti­dis­ci­pli­na­ry exper­tise to inter­na­tio­nal orga­ni­sa­tions invol­ved in One health issues (WHO, OIE, FAO, UNEP). 

Howe­ver, top-level coope­ra­tion is not where our atten­tion is nee­ded most. One Health needs to be taken serious­ly by the state, yes, but we need work in the field too. To iden­ti­fy the right indi­ca­tors we should be stu­dying, we need to keep a close eye on what’s hap­pe­ning on the ground. That isn’t only the job of resear­chers ; it involves far­mers, natio­nal parks, civil ser­vices and so forth. 

Hence, we need things to hap­pen on the ter­ri­to­rial scale : “think glo­bal, act local.” For example, there is a shift in focus from pro­tec­ted zones in the form of natu­ral parks to “land sha­ring”. The lat­ter takes into account the fact that nature doesn’t reco­gnise the boun­da­ry bet­ween a natio­nal park and a human-occu­pied zone. Ins­tead, the two need to be mer­ged so that bio­di­ver­si­ty can be main­tai­ned intelligently. 

At the One Pla­net Sum­mit in France on the 11th Janua­ry 2021, Pre­sident Macron announ­ced the Pre­zode Pro­ject, with the aim “to reduce the risk of emer­gence and ensure the rele­vance of sur­veillance and ear­ly detec­tion sys­tems at the local, regio­nal and glo­bal levels 3,4.” This is a very ambi­tious inter­na­tio­nal ini­tia­tive, poli­ti­cal­ly sup­por­ted at the highest level in France and will be finan­cial­ly sup­por­ted by French Minis­try of research, Minis­try of Europe and forei­gn affairs. Also, in the future by many more coun­tries and foun­da­tions and orga­ni­sa­tions around the world ; we are moving things for­ward with over 1,000 scien­tists invol­ved from 50 countries.

1https://​mood​-h2020​.eu/
2Smith KF, Gold­berg M, Rosen­thal S, Carl­son L, Chen J, Chen C, Rama­chan­dran S., 2014, Glo­bal rise in human infec­tious disease out- breaks. J. R. Soc. Inter­face 11 : 20140950. http://​dx​.doi​.org/​1​0​.​1​0​9​8​/​r​s​i​f​.​2​0​1​4​.0950 
3https://​pre​zode​.org/​T​h​e​-​i​n​i​t​i​ative
4https://www.thelancet.com/journals/lancet/article/PIIS0140-6736(21)00265–8/fulltext

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